Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ABK74190.1Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. (173 aa)    
Predicted Functional Partners:
ABK75535.1
RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family.
  
    0.778
ABK76137.1
Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243.
  
     0.659
ABK71967.1
Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
       0.527
ABK72108.1
Cupin domain protein; Identified by match to protein family HMM PF07883.
 
    0.516
ABK72815.1
Conserved hypothetical protein.
  
     0.467
ABK72995.1
Transcriptional regulator, AsnC family protein; Identified by match to protein family HMM PF01037.
  
  
 0.444
ABK74253.1
Taurine-pyruvate aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
    0.434
ABK75553.1
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.413
ABK73799.1
Conserved hypothetical alanine and leucine rich protein; Identified by match to protein family HMM PF01908.
   
    0.409
ABK70362.1
Conserved hypothetical protein; Identified by match to protein family HMM PF01908.
   
    0.409
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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