Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK75078.1Conserved hypothetical protein; Identified by match to protein family HMM PF06267. (224 aa)    
Predicted Functional Partners:
ABK70754.1
Flavin-containing monooxygenase FMO.
 
    0.952
ABK75987.1
Endoribonuclease L-PSP superfamily protein; Identified by match to protein family HMM PF01042.
 
    0.951
ABK71862.1
AmiB; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891; Belongs to the peptidase M20A family.
 
    0.831
aspA
Aspartate ammonia-lyase; Identified by match to protein family HMM PF00206.
  
    0.816
ABK76026.1
Transcriptional regulator, LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.
 
     0.696
ABK71233.1
Identified by match to protein family HMM PF02133; Belongs to the purine-cytosine permease (2.A.39) family.
 
    0.679
ABK74414.1
Flavoprotein involved in K+ transport; Identified by match to protein family HMM PF07992.
 
     0.629
ABK70414.1
LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.
 
     0.608
ABK71870.1
Endoribonuclease L-PSP, putative; Identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004.
 
    0.400
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: high (86%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.