Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABK71233.1Identified by match to protein family HMM PF02133; Belongs to the purine-cytosine permease (2.A.39) family. (483 aa)    
Predicted Functional Partners:
ABK75987.1
Endoribonuclease L-PSP superfamily protein; Identified by match to protein family HMM PF01042.
 
  
 0.902
ABK76123.1
MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047.
   
  
 0.769
ABK69590.1
Ferredoxin-dependent glutamate synthase; Identified by match to protein family HMM PF00355; match to protein family HMM PF01645; Belongs to the glutamate synthase family.
     
 0.767
ABK71303.1
Regulatory protein, MarR; Identified by match to protein family HMM PF01047.
      
 0.766
ABK71862.1
AmiB; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891; Belongs to the peptidase M20A family.
  
  
 0.760
ABK75078.1
Conserved hypothetical protein; Identified by match to protein family HMM PF06267.
 
    0.679
ABK70754.1
Flavin-containing monooxygenase FMO.
 
    0.624
aspA
Aspartate ammonia-lyase; Identified by match to protein family HMM PF00206.
  
  
 0.592
ABK71463.1
Pyruvate dehydrogenase; Identified by match to protein family HMM PF00205; match to protein family HMM PF00355; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family.
  
  
 0.551
ABK72696.1
Conserved hypothetical protein.
       0.483
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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