Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK75925.1Pentachlorophenol 4-monooxygenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. (382 aa)    
Predicted Functional Partners:
ABK71088.1
6-hydroxy-D-nicotine oxidase; Identified by match to protein family HMM PF01565.
 
  
 0.861
ABK70323.1
Cinnamoyl ester hydrolase; Identified by match to protein family HMM PF01638.
     
 0.827
ABK71087.1
TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440.
 
   
 0.709
ABK73916.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.701
ABK70997.1
Identified by match to protein family HMM PF03109.
  
 0.663
ABK73982.1
Identified by match to protein family HMM PF03109.
  
 0.661
ABK75041.1
Methyltransferase small domain superfamily protein; Identified by match to protein family HMM PF05175; match to protein family HMM PF05724.
 
 0.640
ABK76062.1
Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111.
  
 0.609
ABK73637.1
Conserved hypothetical protein.
  
 0.588
ABK70302.1
Methyltransferase type 12; Identified by match to protein family HMM PF05724.
  
 0.588
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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