Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK70996.1Conserved hypothetical protein. (129 aa)    
Predicted Functional Partners:
ABK74834.1
Conserved hypothetical protein.
  
  
 0.868
ABK73381.1
UsfY protein.
  
  
 0.866
ABK76179.1
Conserved hypothetical protein.
  
    0.773
ABK69549.1
Identified by match to protein family HMM PF04471.
       0.522
ABK69850.1
Conserved hypothetical protein.
   
  
 0.500
ABK72486.1
Conserved domain protein.
   
  
 0.475
ABK71330.1
Hypothetical protein; Identified by Glimmer2; putative.
   
  
 0.471
ABK69570.1
Conserved hypothetical protein.
   
  
 0.470
ABK72708.1
Hypothetical protein; Identified by Glimmer2; putative.
   
  
 0.470
ABK74983.1
Conserved hypothetical protein.
   
  
 0.470
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.