Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK75582.1Conserved hypothetical protein. (340 aa)    
Predicted Functional Partners:
ABK70776.1
Membrane transport protein; Identified by match to protein family HMM PF01810; match to protein family HMM TIGR00948.
      
 0.824
mimD
Propane monooxygenase coupling protein; Effector component of the propane 2-monooxygenase multicomponent enzyme system which is involved in the degradation of propane via the O2-dependent hydroxylation of propane.
      
 0.821
ABK72773.1
Conserved hypothetical protein.
 
    0.800
ABK75526.1
ChaB protein; Identified by match to protein family HMM PF06150.
  
  
 0.627
ABK69850.1
Conserved hypothetical protein.
 
    0.616
ABK71993.1
Methylase, putative; Identified by match to protein family HMM PF01170; match to protein family HMM PF05175; match to protein family HMM TIGR00537.
 
    0.573
ABK71446.1
Stas domain, putative; Identified by match to protein family HMM PF01740.
     
 0.536
ABK70046.1
Conserved hypothetical protein.
 
     0.532
ABK75132.1
Antar domain protein; Identified by match to protein family HMM PF03861.
 
     0.498
ABK69570.1
Conserved hypothetical protein.
 
    0.436
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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