Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK71680.1Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. (310 aa)    
Predicted Functional Partners:
ABK71190.1
Putative ribosome small subunit-dependent GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
       0.538
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
       0.538
ABK70725.1
Phytoene synthase; Identified by match to protein family HMM PF00494.
   
    0.476
ABK70498.1
Trp region conserved hypothetical membrane protein; Identified by match to protein family HMM TIGR02234.
  
    0.458
ABK70106.1
Thiopurine S-methyltransferase (tpmt) superfamily protein; Identified by match to protein family HMM PF05724.
  
   
 0.453
ABK75365.1
Oxidoreductase; Identified by match to protein family HMM PF01494.
  
  
  0.432
ABK73059.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02586; Belongs to the SOS response-associated peptidase family.
       0.402
ABK75470.1
Transferase; Identified by match to protein family HMM PF05175; Belongs to the methyltransferase superfamily.
       0.402
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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