STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74699.1Benzoate 1,2-dioxygenase alpha subunit; Identified by match to protein family HMM PF00355; match to protein family HMM PF00848. (454 aa)    
Predicted Functional Partners:
ABK72776.1
Toluate 1,2-dioxygenase beta subunit; Identified by match to protein family HMM PF00866.
 
 0.998
ABK72679.1
Toluate 1,2-dioxygenase electron transfer component; Identified by match to protein family HMM PF00106; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM PF07729; match to protein family HMM PF08021.
 
 
 0.996
ABK70194.1
[NAD+] benzaldehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
  
 
 0.908
ABK73752.1
Muconolactone delta-isomerase 1; Identified by match to protein family HMM PF02426; Belongs to the muconolactone Delta-isomerase family.
 
  
 0.888
catA
Catechol 1,2-dioxygenase; Identified by match to protein family HMM PF00775; match to protein family HMM PF04444; match to protein family HMM TIGR02438.
 
  
 0.870
ABK75893.1
DNA-binding HTH domain containing protein, putative; Identified by match to protein family HMM PF00196; match to protein family HMM PF07721.
 
    0.856
ABK72737.1
Muconate cycloisomerase; Identified by match to protein family HMM PF01188; match to protein family HMM PF02746; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 0.852
ABK69773.1
Muconolactone delta-isomerase; Identified by match to protein family HMM PF02426; Belongs to the muconolactone Delta-isomerase family.
 
  
 0.808
ABK76062.1
Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111.
 
  
 0.695
ABK72073.1
4-hydroxybenzoate transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF06779; match to protein family HMM PF07690.
 
  
 0.654
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.