Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70127.1 | ABK75945.1 | MSMEG_5437 | MSMEG_1928 | Probable serine/threonine-protein kinase PknB; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163. | Identified by match to protein family HMM PF00481. | 0.877 |
| ABK70127.1 | pknB | MSMEG_5437 | MSMEG_0028 | Probable serine/threonine-protein kinase PknB; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163. | Serine-threonine protein kinase; Protein kinase that regulates many aspects of mycobacterial physiology. Is a key component of a signal transduction pathway that regulates cell growth, cell shape and cell division via phosphorylation of target proteins (By similarity). Probably phosphorylates RseA. | 0.487 |
| ABK70730.1 | ABK75945.1 | MSMEG_2467 | MSMEG_1928 | Transketolase, central region; Identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM PF02780. | Identified by match to protein family HMM PF00481. | 0.957 |
| ABK71176.1 | ABK75945.1 | MSMEG_5513 | MSMEG_1928 | Serine/threonine-protein kinase PknE; Identified by match to protein family HMM PF00069. | Identified by match to protein family HMM PF00481. | 0.879 |
| ABK71176.1 | pknB | MSMEG_5513 | MSMEG_0028 | Serine/threonine-protein kinase PknE; Identified by match to protein family HMM PF00069. | Serine-threonine protein kinase; Protein kinase that regulates many aspects of mycobacterial physiology. Is a key component of a signal transduction pathway that regulates cell growth, cell shape and cell division via phosphorylation of target proteins (By similarity). Probably phosphorylates RseA. | 0.514 |
| ABK71684.1 | ABK75945.1 | MSMEG_4366 | MSMEG_1928 | Serine/threonine-protein kinase PknD; Identified by match to protein family HMM PF00069. | Identified by match to protein family HMM PF00481. | 0.893 |
| ABK71684.1 | pknB | MSMEG_4366 | MSMEG_0028 | Serine/threonine-protein kinase PknD; Identified by match to protein family HMM PF00069. | Serine-threonine protein kinase; Protein kinase that regulates many aspects of mycobacterial physiology. Is a key component of a signal transduction pathway that regulates cell growth, cell shape and cell division via phosphorylation of target proteins (By similarity). Probably phosphorylates RseA. | 0.736 |
| ABK73245.1 | ABK75945.1 | MSMEG_0886 | MSMEG_1928 | Serine/threonine-protein kinase PknD; Identified by match to protein family HMM PF00069. | Identified by match to protein family HMM PF00481. | 0.876 |
| ABK73245.1 | pknB | MSMEG_0886 | MSMEG_0028 | Serine/threonine-protein kinase PknD; Identified by match to protein family HMM PF00069. | Serine-threonine protein kinase; Protein kinase that regulates many aspects of mycobacterial physiology. Is a key component of a signal transduction pathway that regulates cell growth, cell shape and cell division via phosphorylation of target proteins (By similarity). Probably phosphorylates RseA. | 0.485 |
| ABK74362.1 | ABK75945.1 | MSMEG_4243 | MSMEG_1928 | Serine/threonine-protein kinase PK-1; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163. | Identified by match to protein family HMM PF00481. | 0.892 |
| ABK74362.1 | pknB | MSMEG_4243 | MSMEG_0028 | Serine/threonine-protein kinase PK-1; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163. | Serine-threonine protein kinase; Protein kinase that regulates many aspects of mycobacterial physiology. Is a key component of a signal transduction pathway that regulates cell growth, cell shape and cell division via phosphorylation of target proteins (By similarity). Probably phosphorylates RseA. | 0.514 |
| ABK74924.1 | ABK75945.1 | MSMEG_1190 | MSMEG_1928 | Serine/threonine-protein kinase PknD; Identified by match to protein family HMM PF00069. | Identified by match to protein family HMM PF00481. | 0.875 |
| ABK74924.1 | pknB | MSMEG_1190 | MSMEG_0028 | Serine/threonine-protein kinase PknD; Identified by match to protein family HMM PF00069. | Serine-threonine protein kinase; Protein kinase that regulates many aspects of mycobacterial physiology. Is a key component of a signal transduction pathway that regulates cell growth, cell shape and cell division via phosphorylation of target proteins (By similarity). Probably phosphorylates RseA. | 0.507 |
| ABK74946.1 | ABK75945.1 | MSMEG_6206 | MSMEG_1928 | Serine/threonine protein kinase PksC; Identified by match to protein family HMM PF00069. | Identified by match to protein family HMM PF00481. | 0.893 |
| ABK74946.1 | pknB | MSMEG_6206 | MSMEG_0028 | Serine/threonine protein kinase PksC; Identified by match to protein family HMM PF00069. | Serine-threonine protein kinase; Protein kinase that regulates many aspects of mycobacterial physiology. Is a key component of a signal transduction pathway that regulates cell growth, cell shape and cell division via phosphorylation of target proteins (By similarity). Probably phosphorylates RseA. | 0.722 |
| ABK75945.1 | ABK70127.1 | MSMEG_1928 | MSMEG_5437 | Identified by match to protein family HMM PF00481. | Probable serine/threonine-protein kinase PknB; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163. | 0.877 |
| ABK75945.1 | ABK70730.1 | MSMEG_1928 | MSMEG_2467 | Identified by match to protein family HMM PF00481. | Transketolase, central region; Identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM PF02780. | 0.957 |
| ABK75945.1 | ABK71176.1 | MSMEG_1928 | MSMEG_5513 | Identified by match to protein family HMM PF00481. | Serine/threonine-protein kinase PknE; Identified by match to protein family HMM PF00069. | 0.879 |
| ABK75945.1 | ABK71684.1 | MSMEG_1928 | MSMEG_4366 | Identified by match to protein family HMM PF00481. | Serine/threonine-protein kinase PknD; Identified by match to protein family HMM PF00069. | 0.893 |
| ABK75945.1 | ABK73245.1 | MSMEG_1928 | MSMEG_0886 | Identified by match to protein family HMM PF00481. | Serine/threonine-protein kinase PknD; Identified by match to protein family HMM PF00069. | 0.876 |
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