STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
mimRSigma factor; Acts as a transcriptional activator of the mimABCD operon encoding the propane 2-monooxygenase complex. (583 aa)    
Predicted Functional Partners:
mimA
Propane monooxygenase hydroxylase large subunit; Component of the propane 2-monooxygenase multicomponent enzyme system which is involved in the degradation of propane via the O2-dependent hydroxylation of propane. Also involved in the degradation of acetone via the O2-dependent hydroxylation of acetone. Also able to catalyze the oxidation of phenol, methylethylketone (2-butanone), 1-propanol and 2-propanol.
 
  
 0.974
mimB
Methane monooxygenase component C; Reductase component of the propane 2-monooxygenase multicomponent enzyme system which is involved in the degradation of propane via the O2-dependent hydroxylation of propane. Reductase catalyzes the transfer of electrons from NADH or NADPH to monooxygenase (Probable).
 
  
 0.838
mimD
Propane monooxygenase coupling protein; Effector component of the propane 2-monooxygenase multicomponent enzyme system which is involved in the degradation of propane via the O2-dependent hydroxylation of propane.
 
    0.785
ABK70753.1
Conserved hypothetical protein; Identified by match to protein family HMM PF01883.
 
    0.711
ABK75152.1
Amidohydrolase 2; Identified by match to protein family HMM PF04909.
 
    0.629
ABK72265.1
Alcohol dehydrogenase; Identified by match to protein family HMM PF00107.
 
    0.581
ABK74368.1
acyl-CoA dehydrogenase family protein member 8; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
      
 0.530
ABK70326.1
Conserved hypothetical protein; Identified by match to protein family HMM PF00296.
      
 0.530
ABK75481.1
Succinic semialdehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
   
 
 0.477
ABK70558.1
Adenylate and Guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211.
  
   
 0.451
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.