STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK72761.1Antibiotic biosynthesis monooxygenase; Identified by match to protein family HMM PF03992. (113 aa)    
Predicted Functional Partners:
ABK75152.1
Amidohydrolase 2; Identified by match to protein family HMM PF04909.
 
    0.721
ABK70753.1
Conserved hypothetical protein; Identified by match to protein family HMM PF01883.
 
    0.712
groL-3
Chaperonin GroL; Plays an essential role in the productive folding of MimA and MimC, and thus in the formation of the active MimABCD complex. Belongs to the chaperonin (HSP60) family.
       0.708
ABK72265.1
Alcohol dehydrogenase; Identified by match to protein family HMM PF00107.
 
    0.694
mimD
Propane monooxygenase coupling protein; Effector component of the propane 2-monooxygenase multicomponent enzyme system which is involved in the degradation of propane via the O2-dependent hydroxylation of propane.
 
    0.604
ABK74818.1
Conserved hypothetical protein.
  
    0.457
ABK71707.1
Deoxyribose-phosphate aldolase superfamily protein; Identified by match to protein family HMM PF01791.
  
  
 0.431
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.410
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.