STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK73131.1Conserved hypothetical protein. (126 aa)    
Predicted Functional Partners:
ABK75664.1
Conserved hypothetical protein.
 
    0.895
ABK73837.1
Phenoxybenzoate dioxygenase beta subunit; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.
 
    0.807
ABK75139.1
Conserved hypothetical protein.
 
     0.745
ABK71355.1
Conserved hypothetical protein.
 
    0.727
ABK70169.1
Conserved hypothetical protein.
  
    0.709
ABK75162.1
Ethyl tert-butyl ether degradation EthD; Identified by match to protein family HMM PF07110; match to protein family HMM TIGR02118.
  
     0.693
ABK73790.1
TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.
  
     0.692
ABK70320.1
phytanoyl-CoA dioxygenase; Identified by match to protein family HMM PF05721.
  
     0.637
ABK72970.1
Conserved hypothetical protein.
  
     0.617
ABK73254.1
Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.
 
    0.539
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.