STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK75664.1Conserved hypothetical protein. (357 aa)    
Predicted Functional Partners:
ABK73131.1
Conserved hypothetical protein.
 
    0.895
ABK73837.1
Phenoxybenzoate dioxygenase beta subunit; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.
 
  
 0.888
ABK75139.1
Conserved hypothetical protein.
 
    0.794
ABK76114.1
Identified by match to protein family HMM PF01493.
 
    0.791
ABK73420.1
Identified by match to protein family HMM PF01070; match to protein family HMM PF01180; match to protein family HMM PF01645; Belongs to the glutamate synthase family.
 
     0.774
ABK71222.1
Glutamine amidotransferase, class II; Identified by match to protein family HMM PF00310.
  
    0.771
ABK74998.1
Transcriptional regulator; Identified by match to protein family HMM PF01381; match to protein family HMM PF07883.
 
     0.765
ABK70169.1
Conserved hypothetical protein.
 
    0.738
ABK73254.1
Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.
 
  
 0.706
glnT
Glutamine synthetase, type III; Identified by match to protein family HMM PF00120; match to protein family HMM TIGR03105; Belongs to the glutamine synthetase family.
 
    0.681
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.