STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK73696.1N-acyl-D-glutamate amidohydrolase. (586 aa)    
Predicted Functional Partners:
ABK73323.1
Hydrolase, alpha/beta fold family protein; Identified by match to protein family HMM PF00561.
       0.780
ABK73177.1
Conserved hypothetical protein.
  
     0.579
ABK70373.1
Conserved hypothetical protein.
  
     0.532
ABK70504.1
N5,N10- methylenetetrahydromethanopterin reductase-related protein; Identified by match to protein family HMM PF00296.
       0.486
ABK73393.1
Integral membrane protein.
  
    0.477
ABK73220.1
D-amino acid deaminase.
 
   
 0.461
ABK72305.1
Beta-lactamase; Identified by match to protein family HMM PF00144.
 
     0.456
ABK72203.1
Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00753.
  
     0.444
ABK72819.1
Putative HTH-type transcriptional regulator; Identified by match to protein family HMM PF00440.
  
  
 0.434
ABK74758.1
Conserved hypothetical protein.
  
     0.410
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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