STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK70763.1Sugar transporter; Identified by match to protein family HMM PF00083. (220 aa)    
Predicted Functional Partners:
ABK70155.1
Arabinose-proton symporter.
  
 0.977
ABK71261.1
Major facilitator family protein transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
 
    0.717
ABK70493.1
Hypothetical metabolite transport protein YaaU; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
 
     0.704
ABK72615.1
Conserved hypothetical protein.
       0.535
ABK74171.1
IS1096, tnpR protein; Identified by similarity to GP:150004; match to protein family HMM PF07929.
       0.521
ABK70401.1
Sugar transporter, permease protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
 
 
 0.516
saeC
Conserved hypothetical protein; May be involved in assembly of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Involved in DNA conjugation in recipient (MKD8) strain.
    
 0.435
ABK70508.1
Metabolite/sugar transport protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
0.430
hisG
ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.
       0.413
hisE
phosphoribosyl-ATP pyrophosphohydrolase; Identified by match to protein family HMM PF01503.
       0.413
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.