STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK70594.1Stress responsive A/B Barrel Domain superfamily protein; Identified by match to protein family HMM PF07876. (105 aa)    
Predicted Functional Partners:
ABK75775.1
Conserved domain protein.
  
     0.633
ABK72454.1
Cytochrome P450 51.
  
     0.489
ABK74840.1
Transcriptional regulator, LacI family protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.
       0.480
ABK72264.1
Conserved domain protein.
  
     0.454
ABK71927.1
Identified by match to protein family HMM PF00293; Belongs to the Nudix hydrolase family.
 
    0.433
ABK71707.1
Deoxyribose-phosphate aldolase superfamily protein; Identified by match to protein family HMM PF01791.
  
  
 0.431
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.410
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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