Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABK75555.1hydroxymethylglutaryl-CoA lyase; Identified by match to protein family HMM PF00682; Belongs to the alpha-IPM synthase/homocitrate synthase family. (314 aa)    
Predicted Functional Partners:
ABK76139.1
Pyruvate synthase; Identified by match to protein family HMM PF01855.
  
 
 0.949
ABK72743.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.949
ABK72443.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.949
ABK75580.1
acetyl-CoA acetyltransferase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.949
ABK72416.1
acetyl-CoA acetyltransferase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.949
ABK71808.1
3-hydroxybutyrate dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM TIGR01963.
 
 
 0.944
orB
Alpha oxoglutarate ferredoxin oxidoreductase, beta subunit; Identified by match to protein family HMM PF02775.
  
 
 0.941
ABK73940.1
3-hydroxy-3-methylglutaryl-CoA lyase; Identified by match to protein family HMM PF00682.
  
  
 
0.940
ABK74315.1
acetoacetyl-CoA synthase; Identified by match to protein family HMM PF00501; match to protein family HMM TIGR01217.
 
 
 0.933
ABK73045.1
acetyl-CoA acetyltransferases; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.931
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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