Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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[Homology]
Score
ABK71963.1Monoxygenase; Identified by match to protein family HMM PF00296. (454 aa)    
Predicted Functional Partners:
ABK72947.1
Integral membrane transport protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
  
    0.778
ABK74251.1
Identified by match to protein family HMM PF02585.
  
    0.751
ABK74734.1
acyl-CoA dehydrogenase domain protein; Identified by match to protein family HMM PF08028.
 
  
 0.697
ABK71581.1
Alcohol dehydrogenase; Identified by match to protein family HMM PF00107.
       0.689
ABK73261.1
Pesticide degrading monooxygenase; Identified by match to protein family HMM PF08028.
 
  
 0.664
ABK72495.1
Aliphatic sulfonate binding protein; Identified by match to protein family HMM TIGR01728.
  
 
 0.662
ABK70934.1
acyl-CoA dehydrogenase; Identified by match to protein family HMM PF08028.
 
  
 0.656
ABK70710.1
acyl-CoA dehydrogenase; Identified by match to protein family HMM PF08028.
 
  
 0.623
ssuB
Putative aliphatic sulfonates transport ATP-binding protein SsuB; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
  
 
 0.602
ssuB-2
Putative aliphatic sulfonates transport ATP-binding protein SsuB; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
  
 
 0.602
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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