Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70133.1 | ABK70656.1 | MSMEG_2070 | MSMEG_2077 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | acyl-CoA dehydrogenase, C- domain protein; Identified by match to protein family HMM PF08028. | 0.515 |
| ABK70133.1 | ABK71174.1 | MSMEG_2070 | MSMEG_2073 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | 0.838 |
| ABK70133.1 | ABK72429.1 | MSMEG_2070 | MSMEG_2074 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | Conserved hypothetical protein. | 0.853 |
| ABK70133.1 | ABK72430.1 | MSMEG_2070 | MSMEG_2071 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.799 |
| ABK70133.1 | ABK72649.1 | MSMEG_2070 | MSMEG_2068 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | Hypothetical protein; Identified by Glimmer2; putative. | 0.916 |
| ABK70133.1 | ABK73940.1 | MSMEG_2070 | MSMEG_2072 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | 3-hydroxy-3-methylglutaryl-CoA lyase; Identified by match to protein family HMM PF00682. | 0.937 |
| ABK70133.1 | ABK74806.1 | MSMEG_2070 | MSMEG_2069 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | Identified by match to protein family HMM PF01636. | 0.951 |
| ABK70133.1 | hmgA | MSMEG_2070 | MSMEG_2075 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | Homogentisate 1,2-dioxygenase; Identified by match to protein family HMM PF04209. | 0.827 |
| ABK70656.1 | ABK70133.1 | MSMEG_2077 | MSMEG_2070 | acyl-CoA dehydrogenase, C- domain protein; Identified by match to protein family HMM PF08028. | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | 0.515 |
| ABK70656.1 | ABK71174.1 | MSMEG_2077 | MSMEG_2073 | acyl-CoA dehydrogenase, C- domain protein; Identified by match to protein family HMM PF08028. | Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | 0.655 |
| ABK70656.1 | ABK72429.1 | MSMEG_2077 | MSMEG_2074 | acyl-CoA dehydrogenase, C- domain protein; Identified by match to protein family HMM PF08028. | Conserved hypothetical protein. | 0.607 |
| ABK70656.1 | ABK72430.1 | MSMEG_2077 | MSMEG_2071 | acyl-CoA dehydrogenase, C- domain protein; Identified by match to protein family HMM PF08028. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.505 |
| ABK70656.1 | ABK72649.1 | MSMEG_2077 | MSMEG_2068 | acyl-CoA dehydrogenase, C- domain protein; Identified by match to protein family HMM PF08028. | Hypothetical protein; Identified by Glimmer2; putative. | 0.609 |
| ABK70656.1 | ABK73940.1 | MSMEG_2077 | MSMEG_2072 | acyl-CoA dehydrogenase, C- domain protein; Identified by match to protein family HMM PF08028. | 3-hydroxy-3-methylglutaryl-CoA lyase; Identified by match to protein family HMM PF00682. | 0.734 |
| ABK70656.1 | ABK74806.1 | MSMEG_2077 | MSMEG_2069 | acyl-CoA dehydrogenase, C- domain protein; Identified by match to protein family HMM PF08028. | Identified by match to protein family HMM PF01636. | 0.609 |
| ABK70656.1 | hmgA | MSMEG_2077 | MSMEG_2075 | acyl-CoA dehydrogenase, C- domain protein; Identified by match to protein family HMM PF08028. | Homogentisate 1,2-dioxygenase; Identified by match to protein family HMM PF04209. | 0.638 |
| ABK71069.1 | ABK71174.1 | MSMEG_1499 | MSMEG_2073 | Oxygenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | 0.650 |
| ABK71069.1 | ABK73922.1 | MSMEG_1499 | MSMEG_0849 | Oxygenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | Oxygenase. | 0.426 |
| ABK71174.1 | ABK70133.1 | MSMEG_2073 | MSMEG_2070 | Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | 0.838 |
| ABK71174.1 | ABK70656.1 | MSMEG_2073 | MSMEG_2077 | Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | acyl-CoA dehydrogenase, C- domain protein; Identified by match to protein family HMM PF08028. | 0.655 |
page 1 of 4