Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK73431.1Conserved hypothetical protein; Identified by match to protein family HMM PF04229. (198 aa)    
Predicted Functional Partners:
ABK70656.1
acyl-CoA dehydrogenase, C- domain protein; Identified by match to protein family HMM PF08028.
       0.768
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
    
 0.562
ABK73940.1
3-hydroxy-3-methylglutaryl-CoA lyase; Identified by match to protein family HMM PF00682.
  
    0.553
ABK74335.1
Conserved hypothetical protein.
  
     0.550
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
    0.524
ABK72649.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.511
ABK74806.1
Identified by match to protein family HMM PF01636.
       0.511
ABK73749.1
Dipeptidyl aminopeptidase/acylaminoacyl peptidase; Identified by match to protein family HMM PF00561.
  
     0.497
ABK72430.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
       0.496
ABK71174.1
Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family.
       0.496
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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