STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK74285.1Conserved domain protein. (136 aa)    
Predicted Functional Partners:
ABK73554.1
Gp15 protein.
       0.737
secBL
Hypothetical protein; Chaperone component of an orphan antitoxin chaperone (AC) system; there is no toxin gene in close genomic proximity. When expressed in E.coli complements the cold-sensitive phenotype of a secB deletion, suggesting it may have a generic chaperone function. Does not however complement the toxin-neutralizing effect of its M.tuberculosis paralog Rv1957 (AC P95257) in E.coli, probably because the antitoxin genes are not from the same family.
       0.478
ABK75449.1
Conserved hypothetical protein.
       0.478
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.