STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK73341.1Transcriptional regulator, putative; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. (244 aa)    
Predicted Functional Partners:
ABK71491.1
Regulatory protein GntR, HTH; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
  
     0.757
ABK71590.1
Transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
 
  
 0.742
ABK71886.1
GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF02082; match to protein family HMM PF07729.
  
     0.710
ABK72167.1
Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
 
  
 0.706
ABK73089.1
GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
 
  
 0.704
ABK69897.1
Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
 
  
 0.695
ABK75156.1
GntR family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
 
  
 0.687
ABK75964.1
Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
 
  
 0.686
ABK74068.1
Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
 
  
 0.680
ABK75212.1
Transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
 
  
 0.670
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.