Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
ABK69949.1Aminopeptidase, putative; Identified by match to protein family HMM PF00557. (433 aa)    
Predicted Functional Partners:
ABK74677.1
Dipeptide transport system permease protein DppB; Identified by match to protein family HMM PF00528.
     
 0.786
ABK70485.1
Aliphatic amidase; Identified by match to protein family HMM PF00795.
  
 
 0.759
ABK72955.1
Identified by match to protein family HMM PF03446; match to protein family HMM PF03807.
  
    0.722
ABK74863.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.711
ABK70855.1
Carveol dehydrogenase; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.674
ABK69535.1
Carveol dehydrogenase; Identified by match to protein family HMM PF00106.
 
 
 
 0.663
ABK70507.1
Carveol dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
 
 
 
 0.660
ABK75142.1
Cystathionine beta-synthase; Identified by match to protein family HMM PF00291; match to protein family HMM PF00571; match to protein family HMM TIGR01137.
  
 
 0.616
ABK69873.1
Carveol dehydrogenase; Identified by match to protein family HMM PF00106.
   
 
 0.612
ABK71664.1
acetyl-CoA acetyltransferase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930.
   
 
 0.588
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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