STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABK69576.1Nitrilotriacetate monooxygenase component A. (458 aa)    
Predicted Functional Partners:
ABK70514.1
Fmnh2-utilizing oxygenase.
 
    
0.807
fgd
F420-dependent glucose-6-phosphate dehydrogenase; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone. Appears to have a role in resistance to oxidative stress, via its consumption of G6P that serves as a source of reducing power to combat oxidative stress in mycobacteria. Cannot use NAD, NADP, FAD or FMN instead of coenzyme F420 as an electron acceptor. Exhibits nearly no activity with D-mannose-6- phosphate or D-fructose-6-phosphate as substrate. Belongs to the F420-dependent glucose-6-phosphate dehydrogenase family.
  
  
 0.787
ABK73605.1
NADPH-dependent fmn reductase; Identified by match to protein family HMM PF03358.
 
 0.690
ABK72495.1
Aliphatic sulfonate binding protein; Identified by match to protein family HMM TIGR01728.
  
 
 0.486
ABK72349.1
ABC nitrate/sulfonate/bicarbonate family protein transporter, periplasmic ligand binding protein.
  
 
 0.486
ABK73565.1
Monooxygenase; Identified by match to protein family HMM PF00296.
  
  
 0.474
ABK71685.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
 
 0.473
ABK71607.1
Putative aliphatic sulfonates transport permease protein SsuC; Identified by match to protein family HMM PF00528.
  
 
 0.473
ABK74762.1
ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit; Identified by match to protein family HMM PF00528.
  
 
 0.473
ABK75020.1
NADH-fmn oxidoreductase; Identified by match to protein family HMM PF01613.
 
 
 0.447
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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