STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK69685.1Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771. (410 aa)    
Predicted Functional Partners:
ABK70566.1
acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF08028.
 
 0.899
ABK74605.1
acyl-CoA dehydrogenase domain protein; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.
    
0.848
ABK75177.1
acyl-CoA dehydrogenase domain protein; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.
 
     0.774
ABK71747.1
ZbpA protein; Identified by match to protein family HMM PF01575.
 
 0.770
ABK75990.1
Putative 3-hydroxyacyl-CoA dehydrogenase; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737.
  
 0.762
ABK75099.1
acyl-CoA dehydrogenase, C- domain protein; Identified by match to protein family HMM PF00441; match to protein family HMM PF02771.
 
  
 0.736
ABK69713.1
Nonspecific lipid-transfer protein.
 
 0.713
ABK72252.1
acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02771; match to protein family HMM PF08028.
 
  
 0.709
ABK74844.1
Conserved hypothetical protein; Identified by match to protein family HMM PF01796.
 
 0.701
ABK71210.1
acyl-CoA dehydrogenase protein; Identified by match to protein family HMM PF00441; match to protein family HMM PF02771.
 
  
 0.689
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.