STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK70676.1Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. (217 aa)    
Predicted Functional Partners:
ABK72055.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
 
   
0.832
ABK74189.1
Regulatory protein, TetR; Identified by match to protein family HMM PF00440.
  
     0.549
ABK71124.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
     0.477
ABK72036.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
     0.466
ABK72085.1
TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440.
  
  
 0.457
ABK73067.1
Putative transcriptional regulator; Identified by match to protein family HMM PF01638.
  
    0.457
ABK72727.1
Transcription regulator AmtR; Identified by match to protein family HMM PF00440.
  
     0.443
ABK74448.1
Chromosome replication initiation inhibitor protein; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family.
   
 
 0.409
ABK75594.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
     0.409
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.