ABK72218.1 protein (Mycolicibacterium smegmatis)

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second shell of interactors

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proteins of unknown 3D structure

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Score

ABK72218.1

AMP-binding enzyme; Identified by match to protein family HMM PF00501. (500 aa)

Predicted Functional Partners:

pks

0.930

ABK74471.1

0.920

ABK73865.1

0.914

ABK69804.1

0.909

ABK74130.1

0.882

pks5

0.880

ABK71774.1

0.874

ABK70651.1

0.871

ABK70103.1

0.862

ABK70529.1

0.825

Your Current Organism:

Mycolicibacterium smegmatis

NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABK69804.1	ABK70103.1	MSMEG_2219	MSMEG_4757	Identified by match to protein family HMM PF00378.	Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.	0.782
ABK69804.1	ABK70529.1	MSMEG_2219	MSMEG_6767	Identified by match to protein family HMM PF00378.	Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801.	0.621
ABK69804.1	ABK70651.1	MSMEG_2219	MSMEG_2220	Identified by match to protein family HMM PF00378.	enoyl-CoA hydratase/isomerase; Identified by match to protein family HMM PF00378.	0.876
ABK69804.1	ABK71774.1	MSMEG_2219	MSMEG_6392	Identified by match to protein family HMM PF00378.	Polyketide synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801.	0.664
ABK69804.1	ABK72218.1	MSMEG_2219	MSMEG_2215	Identified by match to protein family HMM PF00378.	AMP-binding enzyme; Identified by match to protein family HMM PF00501.	0.909
ABK69804.1	ABK73865.1	MSMEG_2219	MSMEG_2218	Identified by match to protein family HMM PF00378.	Identified by match to protein family HMM PF00378.	0.884
ABK69804.1	ABK74130.1	MSMEG_2219	MSMEG_2216	Identified by match to protein family HMM PF00378.	AMP-binding enzyme; Identified by match to protein family HMM PF00501.	0.895
ABK69804.1	ABK74471.1	MSMEG_2219	MSMEG_2217	Identified by match to protein family HMM PF00378.	AMP-dependent synthetase and ligase; Identified by match to protein family HMM PF00501.	0.918
ABK69804.1	pks	MSMEG_2219	MSMEG_0408	Identified by match to protein family HMM PF00378.	Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801.	0.765
ABK69804.1	pks5	MSMEG_2219	MSMEG_4727	Identified by match to protein family HMM PF00378.	Mycocerosic acid synthase; Polyketide synthase involved in the biosynthesis of 2,4- dimethyl-2-eicosenoic acid, a lipid component of the lipooligosaccharides (LOS) which are not located at the bacterial surface but rather in deeper compartments of the cell envelope of M.smegmatis.	0.621
ABK70103.1	ABK69804.1	MSMEG_4757	MSMEG_2219	Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.	Identified by match to protein family HMM PF00378.	0.782
ABK70103.1	ABK70529.1	MSMEG_4757	MSMEG_6767	Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.	Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801.	0.999
ABK70103.1	ABK70651.1	MSMEG_4757	MSMEG_2220	Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.	enoyl-CoA hydratase/isomerase; Identified by match to protein family HMM PF00378.	0.782
ABK70103.1	ABK71774.1	MSMEG_4757	MSMEG_6392	Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.	Polyketide synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801.	0.999
ABK70103.1	ABK72218.1	MSMEG_4757	MSMEG_2215	Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.	AMP-binding enzyme; Identified by match to protein family HMM PF00501.	0.862
ABK70103.1	ABK73865.1	MSMEG_4757	MSMEG_2218	Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.	Identified by match to protein family HMM PF00378.	0.782
ABK70103.1	ABK74130.1	MSMEG_4757	MSMEG_2216	Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.	AMP-binding enzyme; Identified by match to protein family HMM PF00501.	0.862
ABK70103.1	ABK74471.1	MSMEG_4757	MSMEG_2217	Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.	AMP-dependent synthetase and ligase; Identified by match to protein family HMM PF00501.	0.871
ABK70103.1	pks	MSMEG_4757	MSMEG_0408	Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.	Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801.	0.999
ABK70103.1	pks5	MSMEG_4757	MSMEG_4727	Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.	Mycocerosic acid synthase; Polyketide synthase involved in the biosynthesis of 2,4- dimethyl-2-eicosenoic acid, a lipid component of the lipooligosaccharides (LOS) which are not located at the bacterial surface but rather in deeper compartments of the cell envelope of M.smegmatis.	0.999