STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK74433.1Bile-acid 7-alpha dehydratase. (148 aa)    
Predicted Functional Partners:
ABK75868.1
Conserved hypothetical protein.
 
    0.696
ABK72357.1
Conserved hypothetical protein.
  
     0.685
ABK70713.1
Amidohydrolase 3; Identified by match to protein family HMM PF07969.
 
     0.663
ABK70734.1
Conserved hypothetical protein.
  
     0.658
ABK72033.1
Identified by match to protein family HMM PF00106.
 
  
  0.625
ABK72635.1
3-ketosteroid dehydrogenase; Identified by match to protein family HMM PF00890.
  
  
  0.615
ABK71772.1
Conserved hypothetical protein.
 
  
 0.609
ABK73927.1
FAD binding domain, putative; Identified by match to protein family HMM PF00890; match to protein family HMM PF01266.
 
  
 0.598
ABK73925.1
Steroid delta-isomerase; Identified by match to protein family HMM PF02136.
 
  
 0.598
dapB
Dihydrodipicolinate reductase, N-terminus domain protein; Identified by match to protein family HMM PF01113.
  
     0.560
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.