Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK70899.1Aminoglycoside phosphotransferase; Identified by match to protein family HMM PF01636. (353 aa)    
Predicted Functional Partners:
ABK72733.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.
 0.941
ABK69635.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.
 0.892
ABK73304.1
Methyltransferase type 11; Identified by match to protein family HMM PF01170.
       0.711
ABK69988.1
Oxidoreductase, zinc-binding dehydrogenase family protein; Identified by match to protein family HMM PF00107.
 
  0.622
ABK73305.1
Oxidoreductase, zinc-binding dehydrogenase family protein; Identified by match to protein family HMM PF00107.
 
 0.614
ABK73073.1
Alcohol dehydrogenase, zinc-binding; Identified by match to protein family HMM PF00107.
 
  0.614
ABK71747.1
ZbpA protein; Identified by match to protein family HMM PF01575.
 
 
 0.513
ABK70133.1
Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.
 
 0.467
ABK73274.1
Conserved hypothetical protein.
  
  
 0.467
ABK73663.1
acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770.
 
 0.454
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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