Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABK75553.1Hypothetical protein; Identified by Glimmer2; putative. (169 aa)    
Predicted Functional Partners:
ABK70097.1
Haloacetate dehalogenase H-1; Identified by match to protein family HMM PF00561.
    
 0.871
ABK72140.1
Putative glycosyltransferase; Identified by match to protein family HMM PF00201; match to protein family HMM PF03033; match to protein family HMM TIGR01426.
 
     0.824
ABK70459.1
Conserved hypothetical protein.
  
  
 0.812
ABK73942.1
GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
  
  
 0.812
ABK70364.1
1-acylglycerol-3-phosphate O-acyltransferase; Identified by match to protein family HMM PF01553.
  
  
 0.788
ABK75535.1
RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family.
     
 0.763
ABK72779.1
Hypothetical protein; Identified by Glimmer2; putative; Belongs to the WXG100 family.
      
 0.763
guaA
Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.760
fni
Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
   
 0.754
ABK71204.1
Rmt3 protein.
  
    0.726
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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