Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK74893.1Methylesterase; Identified by match to protein family HMM PF00355. (338 aa)    
Predicted Functional Partners:
ABK72670.1
Dehydrogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593.
  
 0.987
ABK74359.1
Conserved hypothetical protein.
  
    0.863
ABK72679.1
Toluate 1,2-dioxygenase electron transfer component; Identified by match to protein family HMM PF00106; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM PF07729; match to protein family HMM PF08021.
  
 
 0.837
ABK70725.1
Phytoene synthase; Identified by match to protein family HMM PF00494.
  
 0.830
ABK74423.1
Monoglyceride lipase; Involved in the hydrolysis of exogenous host. Catalyzes the hydrolysis of long-chain monoacylglycerol. It hydrolyzes monoolein and monoacylglycerols (MAG) with fatty acid chains ranging from C14 to C18, but is unable to hydrolyze long-chain diacylglycerol (DAG).
      
 0.761
ABK76183.1
Putative methyltransferase; Identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095.
     
 0.732
ABK72823.1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain; Identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF01071; match to protein family HMM PF02785; match to protein family HMM PF02786.
      
 0.725
ABK69916.1
Conserved hypothetical protein.
  
 0.680
ABK72776.1
Toluate 1,2-dioxygenase beta subunit; Identified by match to protein family HMM PF00866.
  
 0.680
bioF
8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.
     
 0.678
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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