Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK72931.1Low molecular weight protein antigen 6. (129 aa)    
Predicted Functional Partners:
ABK74693.1
Conserved hypothetical protein.
  
     0.761
ABK74620.1
Conserved hypothetical protein.
  
     0.758
ABK72696.1
Conserved hypothetical protein.
  
     0.754
ABK74778.1
Probable conserved transmembrane protein.
  
     0.740
ABK71698.1
Conserved hypothetical protein.
  
     0.735
ABK75644.1
Conserved hypothetical protein.
  
     0.733
ABK69526.1
LppL protein.
  
     0.731
ABK73545.1
Conserved hypothetical protein.
  
    0.726
ABK69690.1
Conserved hypothetical protein.
  
     0.719
rseA
Conserved hypothetical protein; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor SigE. ECF sigma factors are held in an inactive form by an anti-sigma factor (By similarity); Belongs to the zinc-associated anti-sigma factor (ZAS) superfamily.
  
    0.715
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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