Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK69821.1Transcriptional regulator, IclR family protein; Identified by match to protein family HMM PF01614. (233 aa)    
Predicted Functional Partners:
leuC
3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
  
 0.913
leuD
3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.
  
  
 0.893
ABK76161.1
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.812
ABK74990.1
Transcriptional regulator, IclR family protein, putative; Identified by match to protein family HMM PF01614.
  
     0.770
ABK74510.1
IclR-family protein transcriptional regulator; Identified by match to protein family HMM PF01614.
  
     0.765
ABK71987.1
Probable IclR family protein regulator; Identified by match to protein family HMM PF01614.
  
    0.754
ABK71104.1
Urea amidolyase; Identified by match to protein family HMM PF02626; match to protein family HMM PF02682; match to protein family HMM TIGR00724.
  
  
 0.719
ABK70759.1
Putative transcription regulator.
  
     0.644
ABK75676.1
FAD dependent oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01266.
      
 0.573
ABK73370.1
Identified by match to protein family HMM PF01575.
  
 
 0.563
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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