Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK74816.1Transcriptional regulatory protein, AsnC family protein; Identified by match to protein family HMM PF01037. (78 aa)    
Predicted Functional Partners:
ABK73241.1
Conserved hypothetical protein.
  
    0.828
ABK73438.1
Conserved hypothetical protein.
  
     0.642
thiL
Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
       0.627
cobA
uroporphyrin-III C-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469; match to protein family HMM TIGR01470.
  
 
 0.583
ABK76083.1
Cyclase/dehydrase; Identified by match to protein family HMM PF03364.
  
    0.580
ABK73467.1
Cyclase/dehydrase; Identified by match to protein family HMM PF03364.
  
     0.578
ABK72669.1
Anion-transporting ATPase; Identified by match to protein family HMM PF02374.
  
     0.548
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
  
    0.534
ABK71925.1
Transcription elongation factor GreA; Identified by match to protein family HMM PF01272.
 
 
 0.479
ABK75857.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.477
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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