Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK70831.1Alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF07859. (350 aa)    
Predicted Functional Partners:
ABK70897.1
Putative serine-threonine protein kinase.
       0.689
ABK74399.1
Conserved integral membrane protein; Identified by match to protein family HMM PF07884.
       0.689
ABK70226.1
Alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF07859.
  
   
 0.682
pyc
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
  
 
 0.659
DkgA
Morphine 6-dehydrogenase; Identified by match to protein family HMM PF00248; Belongs to the aldo/keto reductase family.
    
 0.631
ABK73906.1
2,5-diketo-D-gluconic acid reductase A; Identified by match to protein family HMM PF00248; Belongs to the aldo/keto reductase family.
    
 0.631
ABK70602.1
Peptidase, S9A/B/C families; Identified by match to protein family HMM PF00326; match to protein family HMM PF07859.
  
   
 0.608
ABK75211.1
Conserved hypothetical protein.
   
 0.575
ABK71774.1
Polyketide synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801.
  
 
 0.526
ABK74760.1
AMP-dependent synthetase and ligase; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550.
  
 0.510
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.