Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ABK74524.1Identified by match to protein family HMM PF01738. (236 aa)    
Predicted Functional Partners:
ABK74081.1
Carboxymethylenebutenolidase; Identified by match to protein family HMM PF01738.
  
  
 
0.953
ABK70214.1
Hydrolase; Identified by match to protein family HMM PF01738.
  
  
 
0.951
ABK76222.1
Maleylacetate reductase; Identified by match to protein family HMM PF00465.
  
 
 0.940
ABK72737.1
Muconate cycloisomerase; Identified by match to protein family HMM PF01188; match to protein family HMM PF02746; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
 
 0.797
ABK75395.1
Conserved hypothetical protein.
 
  
 0.748
catA
Catechol 1,2-dioxygenase; Identified by match to protein family HMM PF00775; match to protein family HMM PF04444; match to protein family HMM TIGR02438.
  
 
 0.698
ABK74649.1
Hydroxyquinol 1,2-dioxygenase; Identified by match to protein family HMM PF00775; match to protein family HMM PF04444.
  
 
 0.698
ABK75118.1
Hydroxyquinol 1,2-dioxygenase; Identified by match to protein family HMM PF00775; match to protein family HMM PF04444.
  
 
 0.698
selO
Conserved hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation).
  
    0.651
ABK72627.1
Conserved hypothetical protein; Belongs to the WXG100 family.
  
   
 0.586
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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