Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABK69837.1acyl-CoA thioesterase; Identified by match to protein family HMM PF02551. (269 aa)    
Predicted Functional Partners:
ABK69766.1
L-carnitine dehydratase/bile acid-inducible protein F; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family.
  
 
  0.872
ABK70553.1
Conserved hypothetical protein.
  
     0.773
ABK70730.1
Transketolase, central region; Identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM PF02780.
       0.757
ABK69754.1
glutaryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
  
 
 0.735
ABK71421.1
enoyl-CoA hydratase; Identified by match to protein family HMM PF00378.
  
 
 0.570
ABK70179.1
Glycerol-3-phosphate acyltransferase; Identified by match to protein family HMM PF01553; Belongs to the GPAT/DAPAT family.
 
  
 0.560
ABK76148.1
Adenine deaminase; Identified by match to protein family HMM PF01979; match to protein family HMM PF07969.
       0.530
katA
Catalase KatA; Identified by similarity to SP:P26901; match to protein family HMM PF00199.
  
 0.519
ABK74752.1
Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
  
 0.519
katA-2
Catalase KatA; Identified by similarity to SP:P26901; match to protein family HMM PF00199.
  
 0.519
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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