STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK70650.1Amino acid permease superfamily protein; Identified by match to protein family HMM PF00324. (486 aa)    
Predicted Functional Partners:
ABK75426.1
propionyl-CoA carboxylase beta chain; Identified by match to protein family HMM PF01039.
      
 0.824
ABK74428.1
UsfY protein.
      
 0.823
ABK75274.1
Hydrolase; Identified by match to protein family HMM PF00795.
   
 0.623
ABK70146.1
Efflux ABC transporter, permease protein, putative; Identified by match to protein family HMM PF02687.
  
  
 0.620
ABK73920.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
  
 0.609
ABK76081.1
Identified by match to protein family HMM PF00909.
  
 
 0.609
ABK72636.1
Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
  
    0.598
ABK74343.1
Alpha-amylase 3; Identified by match to protein family HMM PF00128.
  
 0.595
ABK74424.1
Identified by match to protein family HMM PF00128.
  
 0.595
glgE
Alpha-amylase family protein; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is also able to catalyze the reverse reaction in vitro. Cannot use glucose 1-phosphate as substrate. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
  
 0.595
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.