Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK72520.1Major facilitator superfamily protein; Identified by match to protein family HMM PF07690. (442 aa)    
Predicted Functional Partners:
ABK76154.1
Glyoxylate reductase; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
    0.790
ABK72667.1
Major facilitator superfamily protein MFS_1; Probably plays a role in bacterial growth and resistance to antibiotics.
 
 
 0.717
ABK75421.1
Transporter, major facilitator family protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
 
 
 0.694
ABK74536.1
3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
     
 0.638
ABK70493.1
Hypothetical metabolite transport protein YaaU; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
  
     0.601
ABK70401.1
Sugar transporter, permease protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
 
 
 0.591
ABK75754.1
Major facilitator superfamily protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
 
 
 0.524
ABK71571.1
Putative sialic acid transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
 
 
 0.513
ABK74608.1
Putative transport protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
 
 
 0.490
ABK75662.1
Ferric iron-binding periplasmic protein of ABC transporter; Identified by match to protein family HMM PF01547.
  
  
 0.440
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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