Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ABK74992.1Conserved hypothetical protein; Identified by match to protein family HMM PF08044. (195 aa)    
Predicted Functional Partners:
ABK76053.1
Penicillin-binding protein, putative; Identified by match to protein family HMM PF00905; match to protein family HMM PF05223.
 
     0.720
ABK71703.1
Putative conserved exported protein.
  
     0.710
ABK72734.1
Conserved hypothetical protein.
  
     0.680
ABK72735.1
Conserved hypothetical protein.
  
   
 0.549
ABK75164.1
Bacterial extracellular solute-binding protein, family protein 5; Identified by match to protein family HMM PF00496.
  
     0.549
ABK71009.1
Conserved hypothetical protein.
  
     0.533
ABK73363.1
Bacterial extracellular solute-binding protein, family protein 5; May directly or indirectly regulate the accessibility of the key branch point intermediate, monoacyl phosphatidylinositol tetramannoside (AcPIM4), to the elongating alpha-1,6 mannosyltransferases which could regulate the lipoarabinomannans (LAMs) biosynthesis; Belongs to the bacterial solute-binding protein 5 family.
  
     0.526
ABK71943.1
NLP/P60 family protein.
  
     0.522
ABK76200.1
Bacterial type II secretion system protein F domain; Identified by match to protein family HMM PF00482.
  
     0.496
ABK73037.1
Putative conserved membrane protein.
  
    0.478
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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