Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK72418.1Conserved hypothetical protein; Identified by match to protein family HMM PF02720. (578 aa)    
Predicted Functional Partners:
ABK74749.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02720.
  
  
 0.751
ABK74432.1
HNH endonuclease; Identified by match to protein family HMM PF01844; match to protein family HMM PF02720.
  
  
 0.744
ABK73158.1
HNH endonuclease; Identified by match to protein family HMM PF01844; match to protein family HMM PF02720.
  
  
 0.742
ABK75396.1
HNH endonuclease; Identified by match to protein family HMM PF01844; match to protein family HMM PF02720.
  
  
 0.706
ABK75333.1
Conserved 13e12 repeat family protein; Identified by match to protein family HMM PF01844; match to protein family HMM PF02720.
  
     0.701
ABK70524.1
HNH endonuclease domain protein; Identified by match to protein family HMM PF01844.
  
    0.695
ABK73949.1
Conserved hypothetical protein.
  
     0.645
ABK71630.1
Conserved hypothetical protein.
  
  
 0.618
ABK74958.1
Conserved hypothetical protein.
 
   
 0.593
ABK73452.1
Conserved hypothetical protein.
 
     0.534
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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