Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK75677.1Hydrolase, alpha/beta fold family protein; Identified by match to protein family HMM PF00561. (529 aa)    
Predicted Functional Partners:
aftC
Putative conserved integral membrane protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component of the mycobacterial cell wall. Catalyzes the addition of an arabinofuranosyl (Araf) residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol (DPA) on the C-3 of an alpha-(1->5)-linked Araf from the arabinan backbone of AG.
 
     0.898
ABK74534.1
Putative riboflavin biosynthesis protein RibD; Identified by match to protein family HMM PF01872.
 
  
 0.821
ABK70706.1
Probable exported protein.
  
     0.752
ABK70103.1
Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.
 
 
 0.747
ABK70482.1
LprC protein.
  
     0.743
msrB
methionine-R-sulfoxide reductase; Identified by match to protein family HMM PF01641; match to protein family HMM TIGR00357; Belongs to the MsrB Met sulfoxide reductase family.
     
 0.742
ABK75153.1
Conserved hypothetical protein.
  
  
  0.740
lpqB
LpqB protein; May modulate activity of the MtrAB system in controlling homeostasis of the cell wall and cell division. Belongs to the LpqB lipoprotein family.
  
     0.740
ABK70936.1
Conserved hypothetical protein.
  
  
  0.740
ABK72090.1
Conserved hypothetical protein.
  
     0.735
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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