Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK71846.1Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. (141 aa)    
Predicted Functional Partners:
ABK70160.1
Clp amino terminal domain protein; Identified by match to protein family HMM PF02861.
       0.671
ABK72709.1
Conserved hypothetical protein.
       0.651
ABK73668.1
Identified by match to protein family HMM PF00583.
       0.632
ABK72884.1
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding; Identified by match to protein family HMM PF01243.
 
     0.556
ABK74541.1
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.552
ABK71265.1
Sensor-type histidine kinase PrrB; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.
 
     0.546
ABK71912.1
Conserved hypothetical protein.
  
     0.542
ABK71756.1
Cupin domain protein; Identified by match to protein family HMM PF07883.
 
   
 0.512
ABK71702.1
Conserved hypothetical protein.
  
     0.454
ABK73354.1
Conserved hypothetical protein.
  
     0.454
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (32%) [HD]