STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK74064.1Conserved hypothetical protein. (92 aa)    
Predicted Functional Partners:
ABK70591.1
Oxygenase KshA; Identified by match to protein family HMM PF00355.
 
     0.938
ABK70902.1
3-ketosteroid-delta-1-dehydrogenase; Identified by match to protein family HMM PF00890; match to protein family HMM PF01266.
 
     0.812
ABK71760.1
3-ketosteroid-delta4; Identified by match to protein family HMM PF00890; match to protein family HMM PF01266.
 
     0.791
ABK72992.1
Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.774
ABK71075.1
Biphenyl-2,3-diol 1,2-dioxygenase 1; Identified by match to protein family HMM PF00903.
  
    0.693
ABK74901.1
Conserved hypothetical protein.
  
     0.668
ABK73925.1
Steroid delta-isomerase; Identified by match to protein family HMM PF02136.
  
     0.667
ABK73174.1
Pigment production hydroxylase; Identified by match to protein family HMM PF08028.
  
    0.656
ABK70397.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
     0.654
ABK69760.1
Conserved hypothetical protein.
  
     0.640
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.