Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ABK74320.1Aldo/keto reductase; Identified by match to protein family HMM PF00248. (343 aa)    
Predicted Functional Partners:
ABK71490.1
HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.824
ABK74235.1
Lipid-transfer protein.
    
 
 0.810
ABK74714.1
Lipid-transfer protein.
    
 
 0.810
ABK72393.1
NADPH-flavin oxidoreductase; Identified by match to protein family HMM PF00881; Belongs to the flavin oxidoreductase frp family.
  
  
 0.782
ABK69790.1
Lipid-transfer protein.
    
 
 0.771
ABK73906.1
2,5-diketo-D-gluconic acid reductase A; Identified by match to protein family HMM PF00248; Belongs to the aldo/keto reductase family.
 
0.722
DkgA
Morphine 6-dehydrogenase; Identified by match to protein family HMM PF00248; Belongs to the aldo/keto reductase family.
 
0.721
ABK74628.1
Histone deacetylase superfamily protein; Identified by match to protein family HMM PF00850.
   
  0.405
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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