Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK73761.1Putative membrane protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (375 aa)    
Predicted Functional Partners:
ABK75980.1
Branched-chain amino acid ABC-type transport system, permease component; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
ABK75630.1
Putative periplasmic binding protein; Identified by match to protein family HMM PF01094.
 
 
 0.999
ABK72852.1
ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 
 0.998
ABK73199.1
ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 0.998
ABK75324.1
ABC-type transport system permease protein I; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.977
ABK72964.1
Nitrile hydratase regulator1.
 
 
 0.976
ABK72587.1
Branched-chain amino acid ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 
 0.957
ABK73482.1
Integral membrane protein of the ABC-type Nat permease for neutral amino acids NatD; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.917
ABK72013.1
Hydrophobic amino acid ABC transporter, putative; Identified by match to protein family HMM PF01094.
 
 
 0.900
ABK71360.1
ABC-type transport system periplasmic substrate-binding protein; Identified by match to protein family HMM PF01094.
 
 
 0.891
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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