Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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ABK75623.1Putative HTH-type transcriptional regulator; Identified by match to protein family HMM PF00440. (196 aa)    
Predicted Functional Partners:
ABK73030.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.777
ABK72617.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.625
ABK74909.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
     0.605
ABK71569.1
Transcriptional regulator; Identified by match to protein family HMM PF00440.
  
     0.556
ABK75793.1
TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440.
  
     0.556
ABK75689.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
     0.489
ABK75699.1
TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440.
  
     0.482
ABK75087.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
     0.470
ABK71254.1
Conserved hypothetical protein.
  
    0.444
ABK73709.1
NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF05368; match to protein family HMM PF07993.
  
   
 0.419
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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