| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71010.1 | ABK74551.1 | MSMEG_3140 | MSMEG_3141 | ABC transporter ATP-binding protein, possibly in EF-3 subfamily protein; Identified by match to protein family HMM PF00005. | Conserved domain protein. | 0.870 |
| ABK71010.1 | rplC | MSMEG_3140 | MSMEG_1436 | ABC transporter ATP-binding protein, possibly in EF-3 subfamily protein; Identified by match to protein family HMM PF00005. | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.761 |
| ABK71010.1 | rplD | MSMEG_3140 | MSMEG_1437 | ABC transporter ATP-binding protein, possibly in EF-3 subfamily protein; Identified by match to protein family HMM PF00005. | Ribosomal protein L4/L1 family protein; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.773 |
| ABK71010.1 | rplO | MSMEG_3140 | MSMEG_1474 | ABC transporter ATP-binding protein, possibly in EF-3 subfamily protein; Identified by match to protein family HMM PF00005. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.741 |
| ABK71010.1 | rplU | MSMEG_3140 | MSMEG_4625 | ABC transporter ATP-binding protein, possibly in EF-3 subfamily protein; Identified by match to protein family HMM PF00005. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.733 |
| ABK71010.1 | rplV | MSMEG_3140 | MSMEG_1441 | ABC transporter ATP-binding protein, possibly in EF-3 subfamily protein; Identified by match to protein family HMM PF00005. | 50S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 0.777 |
| ABK71010.1 | rpsE | MSMEG_3140 | MSMEG_1472 | ABC transporter ATP-binding protein, possibly in EF-3 subfamily protein; Identified by match to protein family HMM PF00005. | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.745 |
| ABK71010.1 | rpsP | MSMEG_3140 | MSMEG_2435 | ABC transporter ATP-binding protein, possibly in EF-3 subfamily protein; Identified by match to protein family HMM PF00005. | 30S ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family. | 0.747 |
| ABK71010.1 | rpsT | MSMEG_3140 | MSMEG_4571 | ABC transporter ATP-binding protein, possibly in EF-3 subfamily protein; Identified by match to protein family HMM PF00005. | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.743 |
| ABK71010.1 | trx | MSMEG_3140 | MSMEG_3138 | ABC transporter ATP-binding protein, possibly in EF-3 subfamily protein; Identified by match to protein family HMM PF00005. | Thioredoxin; Identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; Belongs to the thioredoxin family. | 0.728 |
| ABK74551.1 | ABK71010.1 | MSMEG_3141 | MSMEG_3140 | Conserved domain protein. | ABC transporter ATP-binding protein, possibly in EF-3 subfamily protein; Identified by match to protein family HMM PF00005. | 0.870 |
| rplC | ABK71010.1 | MSMEG_1436 | MSMEG_3140 | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | ABC transporter ATP-binding protein, possibly in EF-3 subfamily protein; Identified by match to protein family HMM PF00005. | 0.761 |
| rplC | rplD | MSMEG_1436 | MSMEG_1437 | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Ribosomal protein L4/L1 family protein; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.999 |
| rplC | rplO | MSMEG_1436 | MSMEG_1474 | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.999 |
| rplC | rplU | MSMEG_1436 | MSMEG_4625 | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.999 |
| rplC | rplV | MSMEG_1436 | MSMEG_1441 | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 0.999 |
| rplC | rpsE | MSMEG_1436 | MSMEG_1472 | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.999 |
| rplC | rpsP | MSMEG_1436 | MSMEG_2435 | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 30S ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family. | 0.998 |
| rplC | rpsT | MSMEG_1436 | MSMEG_4571 | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.994 |
| rplD | ABK71010.1 | MSMEG_1437 | MSMEG_3140 | Ribosomal protein L4/L1 family protein; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | ABC transporter ATP-binding protein, possibly in EF-3 subfamily protein; Identified by match to protein family HMM PF00005. | 0.773 |
