Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK75913.1Putative membrane protein. (200 aa)    
Predicted Functional Partners:
ABK70327.1
Conserved hypothetical protein.
  
     0.774
aftC
Putative conserved integral membrane protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component of the mycobacterial cell wall. Catalyzes the addition of an arabinofuranosyl (Araf) residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol (DPA) on the C-3 of an alpha-(1->5)-linked Araf from the arabinan backbone of AG.
  
     0.773
ABK71514.1
Secreted protein.
  
    0.772
ABK75153.1
Conserved hypothetical protein.
  
     0.771
ABK70936.1
Conserved hypothetical protein.
  
     0.771
ABK75671.1
Probable conserved transmembrane protein.
  
     0.771
ABK72090.1
Conserved hypothetical protein.
  
     0.770
ABK70482.1
LprC protein.
  
    0.766
ABK71593.1
LprB protein.
  
     0.763
ABK71134.1
Probable arabinosyltransferase B; Identified by match to protein family HMM PF04602.
  
     0.763
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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