Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK73653.1acyl-CoA thioesterase II; Identified by match to protein family HMM PF02551. (287 aa)    
Predicted Functional Partners:
ABK70553.1
Conserved hypothetical protein.
  
  
  0.960
tesB
acyl-CoA thioesterase II; Identified by match to protein family HMM PF02551; match to protein family HMM TIGR00189.
  
  
 
0.947
ABK70872.1
palmitoyl-CoA hydrolase; Identified by match to protein family HMM PF02551.
  
 
 
0.876
ABK75058.1
acyl-CoA thioesterase; Identified by match to protein family HMM PF02551.
  
  
 
0.868
pyk-2
Pyruvate kinase; Identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; Belongs to the pyruvate kinase family.
  
    0.836
ABK70099.1
Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
       0.663
ABK74565.1
Conserved hypothetical protein.
       0.646
GltD
Glutamate synthase, NADH/nadph, small subunit; Identified by match to protein family HMM PF01266; match to protein family HMM PF07992; match to protein family HMM TIGR01317.
  
  
 0.635
gdh
NAD-glutamate dehydrogenase; Catalyzes the reversible conversion of L-glutamate to 2- oxoglutarate. Highly specific for NAD.
   
    0.599
ABK71868.1
NAD-glutamate dehydrogenase; Identified by match to protein family HMM PF05088.
   
    0.599
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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